Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFP01375 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 AP001486.1-201ENST00000463339 476 ntBASIC3.03□□□□□ -1.92
TNFP01375 AL049873.1-201ENST00000480540 376 ntBASIC3.03□□□□□ -1.92
TNFP01375 RPS4XP22-201ENST00000480755 780 ntBASIC3.03□□□□□ -1.92
TNFP01375 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 NDUFB9P3-201ENST00000521269 501 ntBASIC3.03□□□□□ -1.92
TNFP01375 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.03□□□□□ -1.92
TNFP01375 CR383656.14-201ENST00000551951 406 ntBASIC3.03□□□□□ -1.92
TNFP01375 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 BNIP3P11-201ENST00000603878 563 ntBASIC3.03□□□□□ -1.92
TNFP01375 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.03□□□□□ -1.92
TNFP01375 RMST_8.1-201ENST00000610287 165 ntBASIC3.03□□□□□ -1.92
TNFP01375 AC012531.5-201ENST00000611375 151 ntBASIC3.03□□□□□ -1.92
TNFP01375 AC004241.3-201ENST00000611728 517 ntBASIC3.03□□□□□ -1.92
TNFP01375 ATP5A1P2-202ENST00000616464 443 ntBASIC3.03□□□□□ -1.92
TNFP01375 AC006386.2-201ENST00000624491 75 ntBASIC3.03□□□□□ -1.92
TNFP01375 AC012005.1-201ENST00000624575 75 ntBASIC3.03□□□□□ -1.92
TNFP01375 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TNFP01375 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFP01375 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
TNFP01375 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFP01375 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFP01375 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFP01375 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TNFP01375 SNORA44-201ENST00000384584 132 ntBASIC3.02□□□□□ -1.93
TNFP01375 MIR184-201ENST00000384962 84 ntBASIC3.02□□□□□ -1.93
TNFP01375 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TNFP01375 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
TNFP01375 AC092832.1-201ENST00000422934 400 ntBASIC3.02□□□□□ -1.93
TNFP01375 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFP01375 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFP01375 ISCA1P2-201ENST00000438679 421 ntBASIC3.02□□□□□ -1.93
TNFP01375 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 AC112492.1-201ENST00000449607 712 ntBASIC3.02□□□□□ -1.93
TNFP01375 AC010401.1-201ENST00000463867 348 ntBASIC3.02□□□□□ -1.93
TNFP01375 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 OR2A20P-203ENST00000498397 1268 ntBASIC3.02□□□□□ -1.93
TNFP01375 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 SMARCE1P4-201ENST00000523647 241 ntBASIC3.02□□□□□ -1.93
TNFP01375 MTND5P21-201ENST00000531961 522 ntBASIC3.02□□□□□ -1.93
TNFP01375 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.02□□□□□ -1.93
TNFP01375 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFP01375 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.02□□□□□ -1.93
TNFP01375 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.02□□□□□ -1.93
TNFP01375 AC009948.4-201ENST00000604692 675 ntBASIC3.02□□□□□ -1.93
TNFP01375 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFP01375 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
TNFP01375 U6.98-201ENST00000637157 84 ntBASIC3.02□□□□□ -1.93
TNFP01375 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
TNFP01375 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFP01375 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TNFP01375 AC092079.1-201ENST00000558620 1985 ntBASIC3.01□□□□□ -1.93
TNFP01375 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFP01375 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
TNFP01375 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.01□□□□□ -1.93
TNFP01375 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TNFP01375 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFP01375 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFP01375 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TNFP01375 RNU6-7-201ENST00000364784 107 ntBASIC3.01□□□□□ -1.93
TNFP01375 RNU6-8-201ENST00000365467 107 ntBASIC3.01□□□□□ -1.93
TNFP01375 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
TNFP01375 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFP01375 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.01□□□□□ -1.93
TNFP01375 RPL32P35-201ENST00000415214 394 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.01□□□□□ -1.93
TNFP01375 USP9YP31-201ENST00000431405 881 ntBASIC3.01□□□□□ -1.93
TNFP01375 BX679664.1-201ENST00000434429 253 ntBASIC3.01□□□□□ -1.93
TNFP01375 AL138787.1-202ENST00000437804 898 ntBASIC3.01□□□□□ -1.93
TNFP01375 RPL37P3-201ENST00000456825 293 ntBASIC3.01□□□□□ -1.93
TNFP01375 AP001086.1-201ENST00000494882 321 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC080014.1-201ENST00000496877 1201 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC098799.1-201ENST00000504752 800 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFP01375 HIGD1AP3-201ENST00000515857 278 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC011602.1-201ENST00000546484 331 ntBASIC3.01□□□□□ -1.93
TNFP01375 MIR3186-201ENST00000577404 85 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.01□□□□□ -1.93
TNFP01375 AC011492.1-201ENST00000600023 315 ntBASIC3.01□□□□□ -1.93
TNFP01375 AL049844.2-201ENST00000604280 628 ntBASIC3.01□□□□□ -1.93
TNFP01375 AL365503.1-201ENST00000605247 905 ntBASIC3.01□□□□□ -1.93
TNFP01375 AL162574.2-201ENST00000614618 657 ntBASIC3.01□□□□□ -1.93
TNFP01375 AC092628.2-201ENST00000622492 339 ntBASIC3.01□□□□□ -1.93
TNFP01375 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
TNFP01375 MIR7153-201ENST00000637758 57 ntBASIC3.01□□□□□ -1.93
TNFP01375 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.01□□□□□ -1.93
TNFP01375 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TNFP01375 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TNFP01375 SYT14P1-202ENST00000600441 1448 ntBASIC3.01□□□□□ -1.93
TNFP01375 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
TNFP01375 RNU1-75P-201ENST00000347264 129 ntBASIC3□□□□□ -1.93
TNFP01375 AP002088.1-201ENST00000382740 395 ntBASIC3□□□□□ -1.93
TNFP01375 MTCO3P31-201ENST00000405526 789 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms