Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
LDB2O43679 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.27□□□□□ -1.73
LDB2O43679 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.27□□□□□ -1.73
LDB2O43679 AC026951.1-201ENST00000559530 2459 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC134882.1-201ENST00000603738 1676 ntBASIC4.27□□□□□ -1.73
LDB2O43679 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LDB2O43679 RNU6-623P-201ENST00000363143 105 ntBASIC4.27□□□□□ -1.73
LDB2O43679 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 RN7SKP235-201ENST00000410662 305 ntBASIC4.27□□□□□ -1.73
LDB2O43679 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 RPP40P1-201ENST00000426762 456 ntBASIC4.27□□□□□ -1.73
LDB2O43679 RSL24D1P6-201ENST00000426934 401 ntBASIC4.27□□□□□ -1.73
LDB2O43679 RPL31P54-201ENST00000429803 370 ntBASIC4.27□□□□□ -1.73
LDB2O43679 MTND1P20-201ENST00000430341 950 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC129850.1-201ENST00000436203 508 ntBASIC4.27□□□□□ -1.73
LDB2O43679 HLA-N-201ENST00000437516 135 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.27□□□□□ -1.73
LDB2O43679 PPIAP21-201ENST00000464473 501 ntBASIC4.27□□□□□ -1.73
LDB2O43679 RPL21P71-201ENST00000465598 459 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC080014.1-201ENST00000496877 1201 ntBASIC4.27□□□□□ -1.73
LDB2O43679 SETP14-201ENST00000497538 873 ntBASIC4.27□□□□□ -1.73
LDB2O43679 PGBD4P4-201ENST00000509673 613 ntBASIC4.27□□□□□ -1.73
LDB2O43679 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 AF279873.1-201ENST00000523393 313 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 AC022882.1-201ENST00000532142 501 ntBASIC4.27□□□□□ -1.73
LDB2O43679 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
LDB2O43679 AC023161.2-201ENST00000551218 780 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 ACTR3BP3-201ENST00000565577 979 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 MIR3939-201ENST00000582614 106 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC112220.3-201ENST00000605502 502 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AL353600.1-201ENST00000608148 251 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AL031666.3-201ENST00000609320 1006 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.27□□□□□ -1.73
LDB2O43679 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDB2O43679 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.27□□□□□ -1.73
LDB2O43679 PHKBP1-201ENST00000450951 1951 ntBASIC4.27□□□□□ -1.73
LDB2O43679 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
LDB2O43679 MTND4P34-201ENST00000572715 1371 ntBASIC4.27□□□□□ -1.73
LDB2O43679 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LDB2O43679 RNU1-14P-201ENST00000362759 152 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RNU6-492P-201ENST00000363035 104 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RNU1-132P-201ENST00000364300 164 ntBASIC4.26□□□□□ -1.73
LDB2O43679 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDB2O43679 AC019155.1-201ENST00000382242 574 ntBASIC4.26□□□□□ -1.73
LDB2O43679 Y_RNA.560-201ENST00000384689 102 ntBASIC4.26□□□□□ -1.73
LDB2O43679 SNORD116-4-201ENST00000384733 96 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.26□□□□□ -1.73
LDB2O43679 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.26□□□□□ -1.73
LDB2O43679 BOLA3P4-201ENST00000418151 400 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC234779.1-201ENST00000425910 285 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AL158073.1-201ENST00000426848 1104 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 AL513175.1-201ENST00000431492 780 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 AL590103.1-201ENST00000434488 307 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPS20P1-201ENST00000434853 354 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPS26P40-201ENST00000435209 294 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPS3AP54-201ENST00000435535 734 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPS25P9-201ENST00000435591 252 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.26□□□□□ -1.73
LDB2O43679 ELOCP10-201ENST00000440624 327 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC004865.1-201ENST00000442276 1003 ntBASIC4.26□□□□□ -1.73
LDB2O43679 EEF1A1P1-201ENST00000447052 739 ntBASIC4.26□□□□□ -1.73
LDB2O43679 MTCO2P18-201ENST00000457151 658 ntBASIC4.26□□□□□ -1.73
LDB2O43679 APOOP2-201ENST00000461561 539 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC010618.1-201ENST00000469924 477 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RPL35P6-201ENST00000490024 372 ntBASIC4.26□□□□□ -1.73
LDB2O43679 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
LDB2O43679 AC112198.1-201ENST00000505369 1220 ntBASIC4.26□□□□□ -1.73
LDB2O43679 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.26□□□□□ -1.73
LDB2O43679 AL592156.1-201ENST00000508758 304 ntBASIC4.26□□□□□ -1.73
LDB2O43679 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.26□□□□□ -1.73
LDB2O43679 HSPE1P23-201ENST00000509838 286 ntBASIC4.26□□□□□ -1.73
LDB2O43679 MTND4LP31-201ENST00000514859 294 ntBASIC4.26□□□□□ -1.73
LDB2O43679 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms