Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Gm37025-201ENSMUST00000195159 829 ntBASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
Hmgn5Q9JL35 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Hmgn5Q9JL35 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
Hmgn5Q9JL35 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Prob1-201ENSMUST00000097619 3021 ntBASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Gm18025-201ENSMUST00000221733 862 ntBASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Hmgn5Q9JL35 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Mir5133-201ENSMUST00000174955 77 ntBASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Gm27000-201ENSMUST00000182943 842 ntBASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Gm10517-202ENSMUST00000192970 758 ntBASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmgn5Q9JL35 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Dio3-201ENSMUST00000097228 1449 ntBASIC18.52■□□□□ 0.56
Hmgn5Q9JL35 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms