Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm24513-201ENSMUST00000174964 138 ntBASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn5aQ9JJV9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn5aQ9JJV9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn5aQ9JJV9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Gm27646-201ENSMUST00000183989 110 ntBASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn5aQ9JJV9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn5aQ9JJV9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Scn5aQ9JJV9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.89■□□□□ 0.3
Scn5aQ9JJV9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Gm8655-201ENSMUST00000221159 852 ntBASIC16.89■□□□□ 0.29
Scn5aQ9JJV9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms