Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm23935-201ENSMUST00000102303 57 ntBASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm24270-201ENSMUST00000102326 57 ntBASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm24245-201ENSMUST00000157318 57 ntBASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cacna1fQ9JIS7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Gm6736-201ENSMUST00000166583 948 ntBASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1fQ9JIS7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Gm14822-201ENSMUST00000122247 291 ntBASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1fQ9JIS7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1fQ9JIS7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1fQ9JIS7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.58■□□□□ 0.57
Cacna1fQ9JIS7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Gm24513-201ENSMUST00000174964 138 ntBASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1fQ9JIS7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Mir3113-201ENSMUST00000175478 76 ntBASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm2213-201ENSMUST00000197485 688 ntBASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.57■□□□□ 0.56
Cacna1fQ9JIS7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1fQ9JIS7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms