Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Gm10812-201ENSMUST00000099864 546 ntBASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl28Q9JIL2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl28Q9JIL2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccl28Q9JIL2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Gm715-201ENSMUST00000117865 831 ntBASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccl28Q9JIL2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms