Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Timp4Q9JHB3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.03■□□□□ 0.32
Timp4Q9JHB3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.02■□□□□ 0.32
Timp4Q9JHB3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.02■□□□□ 0.32
Timp4Q9JHB3 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.02■□□□□ 0.32
Timp4Q9JHB3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Timp4Q9JHB3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Timp4Q9JHB3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Gm13216-201ENSMUST00000117145 591 ntBASIC17■□□□□ 0.31
Timp4Q9JHB3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Gm5864-201ENSMUST00000202263 970 ntBASIC17■□□□□ 0.31
Timp4Q9JHB3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Timp4Q9JHB3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17■□□□□ 0.31
Timp4Q9JHB3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.99■□□□□ 0.31
Timp4Q9JHB3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Timp4Q9JHB3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Timp4Q9JHB3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms