Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.28■□□□□ 0.2
Lima1Q9ERG0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.28■□□□□ 0.2
Lima1Q9ERG0 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Lima1Q9ERG0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Lima1Q9ERG0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.27■□□□□ 0.19
Lima1Q9ERG0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lima1Q9ERG0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.25■□□□□ 0.19
Lima1Q9ERG0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lima1Q9ERG0 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Mir1199-201ENSMUST00000117015 119 ntBASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lima1Q9ERG0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms