Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chmp2aQ9DB34 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chmp2aQ9DB34 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Gm18115-201ENSMUST00000221209 621 ntBASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chmp2aQ9DB34 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chmp2aQ9DB34 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp2aQ9DB34 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.14■□□□□ 0.34
Chmp2aQ9DB34 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp2aQ9DB34 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Chmp2aQ9DB34 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Chmp2aQ9DB34 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms