Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mms19Q9D071 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mms19Q9D071 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mms19Q9D071 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mms19Q9D071 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.61■□□□□ 0.41
Mms19Q9D071 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Mms19Q9D071 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.61■□□□□ 0.41
Mms19Q9D071 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Mms19Q9D071 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.61■□□□□ 0.41
Mms19Q9D071 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mms19Q9D071 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.6■□□□□ 0.41
Mms19Q9D071 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Gm11950-201ENSMUST00000121615 838 ntBASIC17.6■□□□□ 0.41
Mms19Q9D071 Gm6623-201ENSMUST00000173570 544 ntBASIC17.6■□□□□ 0.41
Mms19Q9D071 Gm44450-201ENSMUST00000199528 114 ntBASIC17.6■□□□□ 0.41
Mms19Q9D071 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.6■□□□□ 0.41
Mms19Q9D071 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mms19Q9D071 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Mms19Q9D071 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.59■□□□□ 0.41
Mms19Q9D071 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Mms19Q9D071 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Gm27704-201ENSMUST00000185094 107 ntBASIC17.59■□□□□ 0.41
Mms19Q9D071 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.59■□□□□ 0.41
Mms19Q9D071 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Mms19Q9D071 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.59■□□□□ 0.41
Mms19Q9D071 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mms19Q9D071 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Mms19Q9D071 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mms19Q9D071 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mms19Q9D071 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Mms19Q9D071 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.58■□□□□ 0.41
Mms19Q9D071 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Mms19Q9D071 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.58■□□□□ 0.41
Mms19Q9D071 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Mms19Q9D071 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Mms19Q9D071 Gm18421-201ENSMUST00000204122 625 ntBASIC17.58■□□□□ 0.4
Mms19Q9D071 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Mms19Q9D071 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Mms19Q9D071 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Mms19Q9D071 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.58■□□□□ 0.4
Mms19Q9D071 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.58■□□□□ 0.4
Mms19Q9D071 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Mms19Q9D071 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.57■□□□□ 0.4
Mms19Q9D071 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.57■□□□□ 0.4
Mms19Q9D071 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Mms19Q9D071 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Mms19Q9D071 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Mms19Q9D071 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms