Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Gm27405-201ENSMUST00000184201 112 ntBASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx47Q9CWX9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Gm24841-201ENSMUST00000158676 357 ntBASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx47Q9CWX9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ddx47Q9CWX9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ddx47Q9CWX9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx47Q9CWX9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.96■□□□□ 0.31
Ddx47Q9CWX9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ddx47Q9CWX9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ddx47Q9CWX9 App-207ENSMUST00000227737 2827 ntBASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Ddx47Q9CWX9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Gm4968-201ENSMUST00000071458 858 ntBASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ddx47Q9CWX9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx47Q9CWX9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx47Q9CWX9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ddx47Q9CWX9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms