Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cldnd1Q9CQX5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Cldnd1Q9CQX5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Cldnd1Q9CQX5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Chchd1-203ENSMUST00000224633 557 ntBASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cldnd1Q9CQX5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cldnd1Q9CQX5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldnd1Q9CQX5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldnd1Q9CQX5 Gm14701-201ENSMUST00000117156 348 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms