Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.33■□□□□ 0.2
Trim33Q99PP7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.32■□□□□ 0.2
Trim33Q99PP7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.32■□□□□ 0.2
Trim33Q99PP7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.32■□□□□ 0.2
Trim33Q99PP7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim33Q99PP7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Gm13186-201ENSMUST00000118031 316 ntBASIC16.31■□□□□ 0.2
Trim33Q99PP7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim33Q99PP7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.3■□□□□ 0.2
Trim33Q99PP7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.3■□□□□ 0.2
Trim33Q99PP7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.3■□□□□ 0.2
Trim33Q99PP7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Gm27389-201ENSMUST00000183622 195 ntBASIC16.3■□□□□ 0.2
Trim33Q99PP7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim33Q99PP7 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.3■□□□□ 0.2
Trim33Q99PP7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Gm26039-201ENSMUST00000158152 144 ntBASIC16.29■□□□□ 0.2
Trim33Q99PP7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim33Q99PP7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms