Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf111Q99ML9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf111Q99ML9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf111Q99ML9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Il3ra-202ENSMUST00000223589 738 ntBASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf111Q99ML9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Rnf111Q99ML9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Gm27463-201ENSMUST00000183569 57 ntBASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Gm30025-201ENSMUST00000218555 728 ntBASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf111Q99ML9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf111Q99ML9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms