Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smc1bQ920F6 Haglr-201ENSMUST00000100000 2085 ntBASIC18.93■□□□□ 0.62
Smc1bQ920F6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.92■□□□□ 0.62
Smc1bQ920F6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.92■□□□□ 0.62
Smc1bQ920F6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.92■□□□□ 0.62
Smc1bQ920F6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.91■□□□□ 0.62
Smc1bQ920F6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.91■□□□□ 0.62
Smc1bQ920F6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smc1bQ920F6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.9■□□□□ 0.62
Smc1bQ920F6 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.9■□□□□ 0.62
Smc1bQ920F6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.9■□□□□ 0.62
Smc1bQ920F6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smc1bQ920F6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smc1bQ920F6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Smc1bQ920F6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smc1bQ920F6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms