Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdhgc3Q91XX1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.6■□□□□ 0.09
Pcdhgc3Q91XX1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhgc3Q91XX1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.58■□□□□ 0.09
Pcdhgc3Q91XX1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhgc3Q91XX1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhgc3Q91XX1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhgc3Q91XX1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms