Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm27742-201ENSMUST00000184667 60 ntBASIC18.86■□□□□ 0.61
Ddx41Q91VN6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ddx41Q91VN6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Gm45328-201ENSMUST00000210942 917 ntBASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Gm18669-201ENSMUST00000216049 778 ntBASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ddx41Q91VN6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ddx41Q91VN6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx41Q91VN6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx41Q91VN6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx41Q91VN6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ddx41Q91VN6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.83■□□□□ 0.61
Ddx41Q91VN6 Gm13186-201ENSMUST00000118031 316 ntBASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Gm27357-201ENSMUST00000183754 135 ntBASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ddx41Q91VN6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ddx41Q91VN6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms