Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Gm44771-201ENSMUST00000206975 626 ntBASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx39aQ8VDW0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx39aQ8VDW0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx39aQ8VDW0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx39aQ8VDW0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Gm15165-201ENSMUST00000118140 502 ntBASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx39aQ8VDW0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx39aQ8VDW0 Gm44454-201ENSMUST00000198541 138 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms