Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Gm18115-201ENSMUST00000221209 621 ntBASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ndc1Q8VCB1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Haglr-201ENSMUST00000100000 2085 ntBASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Olfr129-201ENSMUST00000122318 993 ntBASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Ndc1Q8VCB1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ndc1Q8VCB1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ndc1Q8VCB1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ndc1Q8VCB1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ndc1Q8VCB1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ndc1Q8VCB1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ndc1Q8VCB1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ndc1Q8VCB1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Gm15794-201ENSMUST00000120182 631 ntBASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ndc1Q8VCB1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ndc1Q8VCB1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ndc1Q8VCB1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms