Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp33Q8R5K2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Gm13418-201ENSMUST00000119097 944 ntBASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp33Q8R5K2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp33Q8R5K2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Gm12260-201ENSMUST00000122447 411 ntBASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Gm27702-201ENSMUST00000184512 56 ntBASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp33Q8R5K2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Gm25990-201ENSMUST00000102440 86 ntBASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Gm15467-201ENSMUST00000120582 445 ntBASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Gm15590-201ENSMUST00000078419 552 ntBASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp33Q8R5K2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms