Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.68■□□□□ 0.26
Slf1Q8R3P9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Gm11249-201ENSMUST00000117071 859 ntBASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Gm12441-201ENSMUST00000121806 588 ntBASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Slf1Q8R3P9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slf1Q8R3P9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm10418-201ENSMUST00000100943 576 ntBASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slf1Q8R3P9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slf1Q8R3P9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Slf1Q8R3P9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.64■□□□□ 0.25
Slf1Q8R3P9 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms