Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nudcd3Q8R1N4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Gm27000-201ENSMUST00000182943 842 ntBASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nudcd3Q8R1N4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Gm37179-201ENSMUST00000194862 823 ntBASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nudcd3Q8R1N4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nudcd3Q8R1N4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Gm43183-201ENSMUST00000200632 547 ntBASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nudcd3Q8R1N4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nudcd3Q8R1N4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms