Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Gm28033-201ENSMUST00000184224 96 ntBASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Gm36967-201ENSMUST00000193814 266 ntBASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Gm18669-201ENSMUST00000216049 778 ntBASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rpp40Q8R1F9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rpp40Q8R1F9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rpp40Q8R1F9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rpp40Q8R1F9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rpp40Q8R1F9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rpp40Q8R1F9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rpp40Q8R1F9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms