Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tram1l1Q8QZR0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tram1l1Q8QZR0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tram1l1Q8QZR0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tram1l1Q8QZR0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tram1l1Q8QZR0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.46■□□□□ 0.22
Tram1l1Q8QZR0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Tram1l1Q8QZR0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tram1l1Q8QZR0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Gm36967-201ENSMUST00000193814 266 ntBASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Gm18195-201ENSMUST00000207604 706 ntBASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tram1l1Q8QZR0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tram1l1Q8QZR0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Tram1l1Q8QZR0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Gm25745-201ENSMUST00000174945 133 ntBASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Gm6376-201ENSMUST00000209407 580 ntBASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tram1l1Q8QZR0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tram1l1Q8QZR0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms