Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf4Q8K4J2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf4Q8K4J2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf4Q8K4J2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Mir6349-201ENSMUST00000184059 97 ntBASIC15.05■□□□□ -0
Ebf4Q8K4J2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ebf4Q8K4J2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ebf4Q8K4J2 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.03■□□□□ -0
Ebf4Q8K4J2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Gm6365-201ENSMUST00000054711 744 ntBASIC15.03■□□□□ -0
Ebf4Q8K4J2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ebf4Q8K4J2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.03■□□□□ -0
Ebf4Q8K4J2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ebf4Q8K4J2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ebf4Q8K4J2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms