Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.55■□□□□ 0.08
Clrn1Q8K445 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.54■□□□□ 0.08
Clrn1Q8K445 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.54■□□□□ 0.08
Clrn1Q8K445 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clrn1Q8K445 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Gm10013-201ENSMUST00000106074 672 ntBASIC15.53■□□□□ 0.08
Clrn1Q8K445 Gm13836-201ENSMUST00000121159 501 ntBASIC15.53■□□□□ 0.08
Clrn1Q8K445 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.53■□□□□ 0.08
Clrn1Q8K445 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clrn1Q8K445 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.52■□□□□ 0.08
Clrn1Q8K445 Gm44450-201ENSMUST00000199528 114 ntBASIC15.52■□□□□ 0.08
Clrn1Q8K445 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.52■□□□□ 0.08
Clrn1Q8K445 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clrn1Q8K445 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.52■□□□□ 0.07
Clrn1Q8K445 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Clrn1Q8K445 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clrn1Q8K445 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clrn1Q8K445 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Clrn1Q8K445 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clrn1Q8K445 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clrn1Q8K445 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms