Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Snrnp27Q8K194 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Snrnp27Q8K194 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Snrnp27Q8K194 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Gm28033-201ENSMUST00000184224 96 ntBASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Gm27704-201ENSMUST00000185094 107 ntBASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Snrnp27Q8K194 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Gm16061-201ENSMUST00000122167 857 ntBASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Snrnp27Q8K194 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Snrnp27Q8K194 Gm12085-201ENSMUST00000119263 940 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms