Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sox30Q8CGW4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.01■□□□□ 0.47
Sox30Q8CGW4 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.01■□□□□ 0.47
Sox30Q8CGW4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox30Q8CGW4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18■□□□□ 0.47
Sox30Q8CGW4 Gm715-201ENSMUST00000117865 831 ntBASIC18■□□□□ 0.47
Sox30Q8CGW4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18■□□□□ 0.47
Sox30Q8CGW4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18■□□□□ 0.47
Sox30Q8CGW4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sox30Q8CGW4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sox30Q8CGW4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18■□□□□ 0.47
Sox30Q8CGW4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox30Q8CGW4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox30Q8CGW4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox30Q8CGW4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sox30Q8CGW4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sox30Q8CGW4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox30Q8CGW4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms