Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Smc4Q8CG47 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm34391-201ENSMUST00000203706 907 ntBASIC20.25■□□□□ 0.83
Smc4Q8CG47 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.25■□□□□ 0.83
Smc4Q8CG47 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.25■□□□□ 0.83
Smc4Q8CG47 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Gm44454-201ENSMUST00000198541 138 ntBASIC20.24■□□□□ 0.83
Smc4Q8CG47 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Smc4Q8CG47 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smc4Q8CG47 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gm43347-201ENSMUST00000200226 580 ntBASIC20.22■□□□□ 0.83
Smc4Q8CG47 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc4Q8CG47 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.21■□□□□ 0.83
Smc4Q8CG47 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc4Q8CG47 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.2■□□□□ 0.82
Smc4Q8CG47 Gm27459-201ENSMUST00000184860 107 ntBASIC20.2■□□□□ 0.82
Smc4Q8CG47 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc4Q8CG47 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms