Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Aph1bQ8C7N7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Aph1bQ8C7N7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
Aph1bQ8C7N7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Aph1bQ8C7N7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Aph1bQ8C7N7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Aph1bQ8C7N7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms