Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Gm24270-201ENSMUST00000102326 57 ntBASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm12260-201ENSMUST00000122447 411 ntBASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm24245-201ENSMUST00000157318 57 ntBASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ptcd1Q8C2E4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ptcd1Q8C2E4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ptcd1Q8C2E4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ptcd1Q8C2E4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ptcd1Q8C2E4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.18■□□□□ 0.82
Ptcd1Q8C2E4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms