Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdh20Q8BIZ0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh20Q8BIZ0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdh20Q8BIZ0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh20Q8BIZ0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Pcdh20Q8BIZ0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh20Q8BIZ0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh20Q8BIZ0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Gm2274-201ENSMUST00000184539 609 ntBASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Gm7977-201ENSMUST00000193787 748 ntBASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Gm18959-201ENSMUST00000208954 655 ntBASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Gm9731-201ENSMUST00000209480 747 ntBASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh20Q8BIZ0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh20Q8BIZ0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms