Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc40Q8BI79 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc40Q8BI79 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc40Q8BI79 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Gm30025-201ENSMUST00000218555 728 ntBASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc40Q8BI79 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Gm13216-201ENSMUST00000117145 591 ntBASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc40Q8BI79 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.14■□□□□ 0.34
Ccdc40Q8BI79 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc40Q8BI79 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc40Q8BI79 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc40Q8BI79 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc40Q8BI79 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc40Q8BI79 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc40Q8BI79 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms