Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim6Q8BGE7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim6Q8BGE7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim6Q8BGE7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim6Q8BGE7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim6Q8BGE7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim6Q8BGE7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim6Q8BGE7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim6Q8BGE7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms