Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.09■□□□□ 0.01
Zc3hc1Q80YV2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zc3hc1Q80YV2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zc3hc1Q80YV2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Zc3hc1Q80YV2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.07■□□□□ 0
Zc3hc1Q80YV2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Gm20049-201ENSMUST00000219950 730 ntBASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zc3hc1Q80YV2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zc3hc1Q80YV2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Zc3hc1Q80YV2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms