Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nrde2Q80XC6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Gm27000-201ENSMUST00000182943 842 ntBASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.68■□□□□ 0.26
Nrde2Q80XC6 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nrde2Q80XC6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nrde2Q80XC6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm12644-201ENSMUST00000119935 606 ntBASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm15372-201ENSMUST00000120729 834 ntBASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Gm18206-201ENSMUST00000207027 926 ntBASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nrde2Q80XC6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nrde2Q80XC6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms