Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Rfx4Q7TNK1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Gm13148-201ENSMUST00000118892 745 ntBASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rfx4Q7TNK1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Gm8495-201ENSMUST00000188740 694 ntBASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx4Q7TNK1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx4Q7TNK1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx4Q7TNK1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Gm18025-201ENSMUST00000221733 862 ntBASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Dio3-201ENSMUST00000097228 1449 ntBASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx4Q7TNK1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Rfx4Q7TNK1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms