Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.03■□□□□ 0.32
Cspg5Q71M36 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.03■□□□□ 0.32
Cspg5Q71M36 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.03■□□□□ 0.32
Cspg5Q71M36 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cspg5Q71M36 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.02■□□□□ 0.32
Cspg5Q71M36 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cspg5Q71M36 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cspg5Q71M36 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.01■□□□□ 0.31
Cspg5Q71M36 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cspg5Q71M36 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cspg5Q71M36 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17■□□□□ 0.31
Cspg5Q71M36 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17■□□□□ 0.31
Cspg5Q71M36 Cmtm5-203ENSMUST00000227441 610 ntBASIC17■□□□□ 0.31
Cspg5Q71M36 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cspg5Q71M36 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cspg5Q71M36 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Cspg5Q71M36 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cspg5Q71M36 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cspg5Q71M36 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms