Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smarcc2Q6PDG5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smarcc2Q6PDG5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc2Q6PDG5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Gm11355-201ENSMUST00000121120 306 ntBASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Gm25016-201ENSMUST00000158399 131 ntBASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Gm6345-202ENSMUST00000180900 204 ntBASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc2Q6PDG5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc2Q6PDG5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Gm9013-201ENSMUST00000132939 882 ntBASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc2Q6PDG5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms