Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Gm15794-201ENSMUST00000120182 631 ntBASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmgb4Q6P8W9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Gm13186-201ENSMUST00000118031 316 ntBASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.21■□□□□ 0.35
Hmgb4Q6P8W9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgb4Q6P8W9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgb4Q6P8W9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgb4Q6P8W9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Hmgb4Q6P8W9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Gm18115-201ENSMUST00000221209 621 ntBASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb4Q6P8W9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb4Q6P8W9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb4Q6P8W9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms