Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.63□□□□□ -0.39
Notch3Q61982 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Notch3Q61982 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Notch3Q61982 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Notch3Q61982 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.62□□□□□ -0.39
Notch3Q61982 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Notch3Q61982 Gm11336-201ENSMUST00000118168 334 ntBASIC12.62□□□□□ -0.39
Notch3Q61982 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.62□□□□□ -0.39
Notch3Q61982 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.62□□□□□ -0.39
Notch3Q61982 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.62□□□□□ -0.39
Notch3Q61982 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.62□□□□□ -0.39
Notch3Q61982 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Notch3Q61982 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.62□□□□□ -0.39
Notch3Q61982 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Notch3Q61982 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.62□□□□□ -0.39
Notch3Q61982 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Notch3Q61982 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Notch3Q61982 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.61□□□□□ -0.39
Notch3Q61982 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Notch3Q61982 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Notch3Q61982 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Notch3Q61982 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Notch3Q61982 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Notch3Q61982 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Notch3Q61982 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Notch3Q61982 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.6□□□□□ -0.39
Notch3Q61982 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Gm2651-201ENSMUST00000203560 838 ntBASIC12.6□□□□□ -0.39
Notch3Q61982 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Notch3Q61982 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Notch3Q61982 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms