Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Gm8097-201ENSMUST00000117903 829 ntBASIC21.35■■□□□ 1.01
Ccne1Q61457 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.35■■□□□ 1.01
Ccne1Q61457 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.35■■□□□ 1.01
Ccne1Q61457 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ccne1Q61457 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccne1Q61457 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccne1Q61457 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.34■■□□□ 1.01
Ccne1Q61457 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Gm11594-201ENSMUST00000122313 162 ntBASIC21.34■■□□□ 1.01
Ccne1Q61457 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccne1Q61457 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccne1Q61457 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccne1Q61457 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccne1Q61457 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 Gm11779-201ENSMUST00000118541 368 ntBASIC21.33■■□□□ 1.01
Ccne1Q61457 Gm11780-201ENSMUST00000136880 516 ntBASIC21.33■■□□□ 1.01
Ccne1Q61457 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccne1Q61457 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.33■■□□□ 1.01
Ccne1Q61457 Gm8000-201ENSMUST00000188378 592 ntBASIC21.33■■□□□ 1.01
Ccne1Q61457 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccne1Q61457 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.33■■□□□ 1
Ccne1Q61457 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccne1Q61457 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.32■■□□□ 1
Ccne1Q61457 Gm12497-201ENSMUST00000138778 237 ntBASIC21.32■■□□□ 1
Ccne1Q61457 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.32■■□□□ 1
Ccne1Q61457 Gm15590-201ENSMUST00000078419 552 ntBASIC21.32■■□□□ 1
Ccne1Q61457 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ccne1Q61457 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccne1Q61457 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ccne1Q61457 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.31■■□□□ 1
Ccne1Q61457 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Gm25925-201ENSMUST00000158314 306 ntBASIC21.31■■□□□ 1
Ccne1Q61457 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.31■■□□□ 1
Ccne1Q61457 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
Ccne1Q61457 Gm6089-201ENSMUST00000197666 938 ntBASIC21.31■■□□□ 1
Ccne1Q61457 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccne1Q61457 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccne1Q61457 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ccne1Q61457 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.3■■□□□ 1
Ccne1Q61457 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.3■■□□□ 1
Ccne1Q61457 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Psmb5-202ENSMUST00000227257 622 ntBASIC21.3■■□□□ 1
Ccne1Q61457 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccne1Q61457 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccne1Q61457 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.29■■□□□ 1
Ccne1Q61457 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms