Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sim2Q61079 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Sim2Q61079 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sim2Q61079 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sim2Q61079 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sim2Q61079 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.05■□□□□ 0.16
Sim2Q61079 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sim2Q61079 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sim2Q61079 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sim2Q61079 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.05■□□□□ 0.16
Sim2Q61079 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sim2Q61079 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sim2Q61079 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sim2Q61079 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sim2Q61079 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.04■□□□□ 0.16
Sim2Q61079 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sim2Q61079 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.04■□□□□ 0.16
Sim2Q61079 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.04■□□□□ 0.16
Sim2Q61079 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.04■□□□□ 0.16
Sim2Q61079 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.04■□□□□ 0.16
Sim2Q61079 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.04■□□□□ 0.16
Sim2Q61079 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sim2Q61079 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sim2Q61079 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.03■□□□□ 0.16
Sim2Q61079 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Sim2Q61079 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.03■□□□□ 0.16
Sim2Q61079 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.03■□□□□ 0.16
Sim2Q61079 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.03■□□□□ 0.16
Sim2Q61079 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sim2Q61079 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Sim2Q61079 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.02■□□□□ 0.16
Sim2Q61079 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sim2Q61079 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sim2Q61079 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sim2Q61079 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.02■□□□□ 0.16
Sim2Q61079 Gm8097-201ENSMUST00000117903 829 ntBASIC16.02■□□□□ 0.16
Sim2Q61079 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.02■□□□□ 0.16
Sim2Q61079 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sim2Q61079 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.02■□□□□ 0.16
Sim2Q61079 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Sim2Q61079 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.02■□□□□ 0.16
Sim2Q61079 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.02■□□□□ 0.16
Sim2Q61079 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.02■□□□□ 0.16
Sim2Q61079 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sim2Q61079 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sim2Q61079 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.02■□□□□ 0.15
Sim2Q61079 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.02■□□□□ 0.15
Sim2Q61079 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.02■□□□□ 0.15
Sim2Q61079 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Sim2Q61079 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sim2Q61079 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sim2Q61079 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sim2Q61079 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms