Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Gm28033-201ENSMUST00000184224 96 ntBASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6d-4Q5R1I0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6d-4Q5R1I0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm44430-201ENSMUST00000203376 995 ntBASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6d-4Q5R1I0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav6d-4Q5R1I0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav6d-4Q5R1I0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms