Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav3-3Q5R1C3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Gm13234-201ENSMUST00000120010 747 ntBASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav3-3Q5R1C3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Gm22325-201ENSMUST00000158904 308 ntBASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav3-3Q5R1C3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav3-3Q5R1C3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-3Q5R1C3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Trav3-3Q5R1C3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-3Q5R1C3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-3Q5R1C3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav3-3Q5R1C3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Reep4-203ENSMUST00000226563 1444 ntBASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Gm42778-201ENSMUST00000199644 553 ntBASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav3-3Q5R1C3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms