Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Gm27389-201ENSMUST00000183622 195 ntBASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Gm18421-201ENSMUST00000204122 625 ntBASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf20Q5DTM8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Gm29707-201ENSMUST00000196325 491 ntBASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf20Q5DTM8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf20Q5DTM8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf20Q5DTM8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf20Q5DTM8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Gm22697-201ENSMUST00000175194 63 ntBASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Gm18101-201ENSMUST00000215769 548 ntBASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf20Q5DTM8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf20Q5DTM8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms