Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Bbof1Q3V079 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.07■□□□□ 0.48
Bbof1Q3V079 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Bbof1Q3V079 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.06■□□□□ 0.48
Bbof1Q3V079 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Bbof1Q3V079 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.05■□□□□ 0.48
Bbof1Q3V079 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.05■□□□□ 0.48
Bbof1Q3V079 Gm7370-201ENSMUST00000219471 767 ntBASIC18.05■□□□□ 0.48
Bbof1Q3V079 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Bbof1Q3V079 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Bbof1Q3V079 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.04■□□□□ 0.48
Bbof1Q3V079 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Bbof1Q3V079 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Gm18101-201ENSMUST00000215769 548 ntBASIC18.04■□□□□ 0.48
Bbof1Q3V079 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Bbof1Q3V079 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Bbof1Q3V079 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms