Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.46■□□□□ 0.71
Col5a2Q3U962 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Col5a2Q3U962 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Mir6404-201ENSMUST00000183699 94 ntBASIC19.45■□□□□ 0.7
Col5a2Q3U962 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.45■□□□□ 0.7
Col5a2Q3U962 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col5a2Q3U962 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Gm13616-201ENSMUST00000120600 222 ntBASIC19.44■□□□□ 0.7
Col5a2Q3U962 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Col5a2Q3U962 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Col5a2Q3U962 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.43■□□□□ 0.7
Col5a2Q3U962 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.43■□□□□ 0.7
Col5a2Q3U962 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.43■□□□□ 0.7
Col5a2Q3U962 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col5a2Q3U962 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col5a2Q3U962 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Gm13597-201ENSMUST00000121239 375 ntBASIC19.41■□□□□ 0.7
Col5a2Q3U962 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.41■□□□□ 0.7
Col5a2Q3U962 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.41■□□□□ 0.7
Col5a2Q3U962 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Gm17968-201ENSMUST00000194902 784 ntBASIC19.41■□□□□ 0.7
Col5a2Q3U962 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.41■□□□□ 0.7
Col5a2Q3U962 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col5a2Q3U962 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Gm45612-201ENSMUST00000211320 160 ntBASIC19.4■□□□□ 0.7
Col5a2Q3U962 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Col5a2Q3U962 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Col5a2Q3U962 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Col5a2Q3U962 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Col5a2Q3U962 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms