Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nhej1Q3KNJ2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nhej1Q3KNJ2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nhej1Q3KNJ2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nhej1Q3KNJ2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nhej1Q3KNJ2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Nhej1Q3KNJ2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms