Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tff1Q08423 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tff1Q08423 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.72□□□□□ -0.21
Tff1Q08423 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tff1Q08423 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tff1Q08423 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tff1Q08423 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tff1Q08423 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.71□□□□□ -0.21
Tff1Q08423 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.71□□□□□ -0.21
Tff1Q08423 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.71□□□□□ -0.21
Tff1Q08423 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.71□□□□□ -0.21
Tff1Q08423 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Tff1Q08423 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tff1Q08423 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tff1Q08423 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.71□□□□□ -0.21
Tff1Q08423 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Tff1Q08423 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.71□□□□□ -0.22
Tff1Q08423 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Tff1Q08423 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tff1Q08423 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.7□□□□□ -0.22
Tff1Q08423 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.7□□□□□ -0.22
Tff1Q08423 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Tff1Q08423 Gm12085-201ENSMUST00000119263 940 ntBASIC13.7□□□□□ -0.22
Tff1Q08423 Gm6659-201ENSMUST00000174752 547 ntBASIC13.7□□□□□ -0.22
Tff1Q08423 Gm7889-201ENSMUST00000185591 958 ntBASIC13.7□□□□□ -0.22
Tff1Q08423 Gm21814-202ENSMUST00000203277 873 ntBASIC13.7□□□□□ -0.22
Tff1Q08423 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.7□□□□□ -0.22
Tff1Q08423 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Tff1Q08423 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Tff1Q08423 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tff1Q08423 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tff1Q08423 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.69□□□□□ -0.22
Tff1Q08423 Gm11539-201ENSMUST00000119837 557 ntBASIC13.69□□□□□ -0.22
Tff1Q08423 Gm13436-201ENSMUST00000120418 567 ntBASIC13.69□□□□□ -0.22
Tff1Q08423 Gm13559-201ENSMUST00000120476 863 ntBASIC13.69□□□□□ -0.22
Tff1Q08423 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tff1Q08423 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tff1Q08423 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tff1Q08423 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.69□□□□□ -0.22
Tff1Q08423 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tff1Q08423 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tff1Q08423 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms